Centres, institutes and hospitals collaborating on research in biomedical engineering and the Graeme Clark Research Institute for Biomedical Engineering include:
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- Aikenhead Centre for Medical Discovery
- ARC Training Centre for Medical Implant Technologies
- ARC Training Centre in Cognitive Computing for Medical Technologies
- ARC Training Centre for Personalised Therapeutics Technologies
- Auckland Bioengineering Institute
- Australia National University
- Australian Government DST Group
- Baker Heart and Diabetes Institute
- Bio21 Institute, The University of Melbourne
- Bionics Institute
- Centre for Eye Research Australia
- Centre for Neural Engineering, The University of Melbourne
- CSIRO
- Florey Institute of Neuroscience and Mental Health
- Lung Health Research Centre, The University of Melbourne
- Melbourne Academic Centre for Health
- Melbourne Centre for Nanofabrication
- Monash Institute of Pharmaceutical Sciences
- Monash University
- National Vision Research Institute
- Queensland Institute of Medical Research
- Queensland University of Technology
- St Vincent’s Institute of Medical Research
- Swinburne University
- Therapeutics Technology Research Initiative, The University of Melbourne
- The Florey Institute of Neuroscience and Mental Health
- University of Melbourne
- University of New South Wales
- University of Queensland
- University of South Australia
- University of Wollongong
- Walter and Eliza Hall Institute
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- Auckland Bioengineering Institute
- ETH Zurich, Switzerland
- Harbin Medical University, China
- Hokkaido University, Japan
- Institute of Neurology, London, UK
- Indiana University, USA
- National University of Singapore
- Sungkyunkwan University, Korea
- University of Auckland, New Zealand
- University of Bayreuth, Germany
- University of Cambridge, UK
- University of College Dublin, UK
- University of Exeter, UK
- University of Leuven, Belgium
- University of Marburg, Germany
- University of Maryland, USA
- University of Michigan, USA
- University of Pennsylvania, USA
- University of Tokyo, Japan
- University of Toronto, Canada
- University of Wisconsin–Madison, USA
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- Epworth Freemasons
- Mercy Hospital for Women
- St Vincent's Hospital, Melbourne
- The Alfred
- The Austin Hospital
- The Avenue Private Hospital
- The Royal Children's Hospital
- The Royal Melbourne Hospital
- The Royal Women's Hospital
- Royal Victorian Eye and Ear Hospital
- Victorian Heart Hospital
- Western Health